Homer
de novo
Motif Results ./data/db/peak_results/CRX234393_CRX234391/homer_group1/H1>
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into
STAMP
More information on motif finding results:
HOMER
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Description of Results
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Tips
Total target sequences = 1000
Total background sequences = 988
* - possible false positive
Rank
Motif
P-value
log P-pvalue
% of Targets
% of Background
STD(Bg STD)
Best Match/Details
Motif File
1
G
U
C
A
G
U
C
A
A
C
U
G
G
U
C
A
A
G
U
C
A
U
G
C
1e-12
-2.933e+01
41.40%
25.93%
156.4bp (176.4bp)
hsa-miR-193a-5p MIMAT0004614 Homo sapiens miR-193a-5p Targets (miRBase)(0.786)
More Information
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Similar Motifs Found
motif file (matrix)
2
C
G
A
U
A
U
C
G
A
C
G
U
C
A
U
G
A
C
G
U
U
G
C
A
G
U
A
C
1e-12
-2.802e+01
51.50%
35.67%
148.5bp (190.2bp)
hsa-miR-3177-5p MIMAT0019215 Homo sapiens miR-3177-5p Targets (miRBase)(0.761)
More Information
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Similar Motifs Found
motif file (matrix)
3
*
A
C
G
U
A
C
G
U
A
C
G
U
A
U
C
G
A
C
U
G
A
C
U
G
A
U
G
C
1e-9
-2.232e+01
30.80%
18.70%
158.3bp (176.6bp)
hsa-miR-186* MIMAT0004612 Homo sapiens miR-186* Targets (miRBase)(0.788)
More Information
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Similar Motifs Found
motif file (matrix)
4
*
C
G
U
A
U
G
A
C
U
A
G
C
C
G
U
A
A
C
U
G
A
C
G
U
C
G
U
A
C
U
G
A
1e-9
-2.162e+01
16.60%
7.69%
192.1bp (178.1bp)
hsa-miR-545* MIMAT0004785 Homo sapiens miR-545* Targets (miRBase)(0.686)
More Information
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Similar Motifs Found
motif file (matrix)
5
*
C
G
U
A
C
A
U
G
U
G
C
A
U
A
G
C
A
C
U
G
U
C
G
A
C
U
A
G
1e-8
-2.049e+01
22.30%
12.16%
147.5bp (168.4bp)
hsa-miR-4638-5p MIMAT0019695 Homo sapiens miR-4638-5p Targets (miRBase)(0.735)
More Information
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Similar Motifs Found
motif file (matrix)
6
*
A
G
U
C
U
C
A
G
A
C
U
G
C
G
A
U
A
C
G
U
A
G
C
U
C
U
A
G
1e-7
-1.830e+01
21.10%
11.81%
154.5bp (177.0bp)
hsa-miR-1537 MIMAT0007399 Homo sapiens miR-1537 Targets (miRBase)(0.733)
More Information
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Similar Motifs Found
motif file (matrix)
7
*
G
C
U
A
A
C
U
G
A
G
U
C
U
G
A
C
A
U
C
G
A
U
G
C
A
G
C
U
1e-7
-1.752e+01
14.90%
7.20%
177.4bp (155.0bp)
hsa-miR-646 MIMAT0003316 Homo sapiens miR-646 Targets (miRBase)(0.670)
More Information
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Similar Motifs Found
motif file (matrix)
8
*
G
C
U
A
A
C
U
G
C
U
G
A
U
C
G
A
A
C
U
G
U
C
A
G
G
A
U
C
A
G
C
U
1e-7
-1.654e+01
11.50%
5.01%
158.1bp (176.9bp)
hsa-miR-3614-3p MIMAT0017993 Homo sapiens miR-3614-3p Targets (miRBase)(0.805)
More Information
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Similar Motifs Found
motif file (matrix)
9
*
G
U
C
A
C
U
G
A
A
C
U
G
A
G
U
C
C
G
U
A
A
C
U
G
C
G
U
A
A
C
U
G
1e-6
-1.452e+01
6.80%
2.31%
164.0bp (150.1bp)
hsa-miR-2467-3p MIMAT0019953 Homo sapiens miR-2467-3p Targets (miRBase)(0.762)
More Information
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Similar Motifs Found
motif file (matrix)
10
*
A
G
C
U
A
G
U
C
A
C
G
U
A
G
U
C
C
G
U
A
A
U
C
G
A
C
G
U
1e-6
-1.420e+01
11.00%
5.07%
127.7bp (171.4bp)
hsa-miR-4797-3p MIMAT0019973 Homo sapiens miR-4797-3p Targets (miRBase)(0.775)
More Information
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Similar Motifs Found
motif file (matrix)
11
*
C
G
U
A
A
G
C
U
C
U
A
G
A
C
U
G
A
G
U
C
A
C
G
U
A
G
U
C
1e-6
-1.418e+01
12.40%
6.12%
174.3bp (212.0bp)
hsa-miR-1233 MIMAT0005588 Homo sapiens miR-1233 Targets (miRBase)(0.699)
More Information
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Similar Motifs Found
motif file (matrix)
12
*
U
A
G
C
C
U
A
G
A
U
G
C
A
C
G
U
A
U
G
C
A
C
G
U
A
G
U
C
C
A
G
U
1e-5
-1.211e+01
49.10%
39.23%
165.5bp (189.5bp)
hsa-miR-4723-3p MIMAT0019839 Homo sapiens miR-4723-3p Targets (miRBase)(0.754)
More Information
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Similar Motifs Found
motif file (matrix)