Information for 1-AAGACC (Motif 1)

G U C A G U C A A C U G G U C A A G U C A U G C
Reverse Opposite:
A U C G A C U G A C G U A G U C A C G U A C G U
p-value:1e-12
log p-value:-2.933e+01
Information Content per bp:1.854
Number of Target Sequences with motif414.0
Percentage of Target Sequences with motif41.40%
Number of Background Sequences with motif256.2
Percentage of Background Sequences with motif25.93%
Average Position of motif in Targets227.7 +/- 156.4bp
Average Position of motif in Background249.0 +/- 176.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-193a-5p MIMAT0004614 Homo sapiens miR-193a-5p Targets (miRBase)

Match Rank:1
Score:0.79
Offset:-14
Orientation:forward strand
Alignment:--------------AAGACC--
TCATCTCGCCCGCAAAGACCCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C A C G U A C G U
A C G U A G U C C G U A A C G U A G U C A C G U A G U C A C U G A G U C A G U C A G U C A C U G A G U C C G U A C G U A C G U A A C U G C G U A A G U C A G U C A G U C C G U A

hsa-miR-3667-5p MIMAT0018089 Homo sapiens miR-3667-5p Targets (miRBase)

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AAGACC---------------
AAAGACCCATTGAGGAGAAGGT
 A C G U G U C A G U C A A C U G G U C A A G U C A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A C G U A C G U A A C U G C G U A A G U C A G U C A G U C C G U A A C G U A C G U A C U G C G U A A C U G A C U G C G U A A C U G C G U A C G U A A C U G A C U G A C G U

hsa-miR-1182 MIMAT0005827 Homo sapiens miR-1182 Targets (miRBase)

Match Rank:3
Score:0.71
Offset:-14
Orientation:forward strand
Alignment:--------------AAGACC---
GTCACATCCCTCCCAAGACCCTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C A C G U A C G U A C G U
A C U G A C G U A G U C C G U A A G U C C G U A A C G U A G U C A G U C A G U C A C G U A G U C A G U C A G U C C G U A C G U A A C U G C G U A A G U C A G U C A G U C A C G U A G U C

hsa-miR-200c* MIMAT0004657 Homo sapiens miR-200c* Targets (miRBase)

Match Rank:4
Score:0.67
Offset:-16
Orientation:forward strand
Alignment:----------------AAGACC
CCAAACACTGCTGGGTAAGACG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C
A G U C A G U C C G U A C G U A C G U A A G U C C G U A A G U C A C G U A C U G A G U C A C G U A C U G A C U G A C U G A C G U C G U A C G U A A C U G C G U A A G U C A C U G

hsa-miR-4696 MIMAT0019790 Homo sapiens miR-4696 Targets (miRBase)

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAGACC-------------
TGCAAGACGGATACTGTCATCT
 A C G U A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A C U G A G U C C G U A C G U A A C U G C G U A A G U C A C U G A C U G C G U A A C G U C G U A A G U C A C G U A C U G A C G U A G U C C G U A A C G U A G U C A C G U

hsa-miR-3663-5p MIMAT0018084 Homo sapiens miR-3663-5p Targets (miRBase)

Match Rank:6
Score:0.67
Offset:-12
Orientation:forward strand
Alignment:------------AAGACC---
CCGAGCACCACGCAGACCAGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C A C G U A C G U A C G U
A G U C A G U C A C U G C G U A A C U G A G U C C G U A A G U C A G U C C G U A A G U C A C U G A G U C C G U A A C U G C G U A A G U C A G U C C G U A A C U G A G U C

hsa-miR-208a MIMAT0000241 Homo sapiens miR-208a Targets (miRBase)

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAGACC--------------
ATAAGACGAGCAAAAAGCTTGT
 A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A A C G U C G U A C G U A A C U G C G U A A G U C A C U G C G U A A C U G A G U C C G U A C G U A C G U A C G U A C G U A A C U G A G U C A C G U A C G U A C U G A C G U

hsa-miR-208b MIMAT0004960 Homo sapiens miR-208b Targets (miRBase)

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAGACC--------------
ATAAGACGAACAAAAGGTTTGT
 A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A A C G U C G U A C G U A A C U G C G U A A G U C A C U G C G U A C G U A A G U C C G U A C G U A C G U A C G U A A C U G A C U G A C G U A C G U A C G U A C U G A C G U

hsa-miR-431 MIMAT0001625 Homo sapiens miR-431 Targets (miRBase)

Match Rank:9
Score:0.66
Offset:-15
Orientation:forward strand
Alignment:---------------AAGACC
TGCATGACGGCCTGCAAGACA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C
A C G U A C U G A G U C C G U A A C G U A C U G C G U A A G U C A C U G A C U G A G U C A G U C A C G U A C U G A G U C C G U A C G U A A C U G C G U A A G U C C G U A

hsa-miR-550a* MIMAT0003257 Homo sapiens miR-550a* Targets (miRBase)

Match Rank:10
Score:0.65
Offset:-16
Orientation:forward strand
Alignment:----------------AAGACC
ATGTGCCTGAGGGAGTAAGACA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G U C A G U C A A C U G G U C A A G U C A U G C
C G U A A C G U A C U G A C G U A C U G A G U C A G U C A C G U A C U G C G U A A C U G A C U G A C U G C G U A A C U G A C G U C G U A C G U A A C U G C G U A A G U C C G U A