Information for 10-ATRGCTC (Motif 11)

C G U A A G C U C U A G A C U G A G U C A C G U A G U C
Reverse Opposite:
A C U G C G U A A C U G A G U C A G U C C U G A C G A U
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.868
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif12.40%
Number of Background Sequences with motif60.5
Percentage of Background Sequences with motif6.12%
Average Position of motif in Targets269.5 +/- 174.3bp
Average Position of motif in Background252.1 +/- 212.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-1233 MIMAT0005588 Homo sapiens miR-1233 Targets (miRBase)

Match Rank:1
Score:0.70
Offset:-12
Orientation:forward strand
Alignment:------------ATRGCTC-
CTGCGGGAGGACAGGGCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U
A G U C A C G U A C U G A G U C A C U G A C U G A C U G C G U A A C U G A C U G C G U A A G U C C G U A A C U G A C U G A C U G A G U C A C G U A G U C C G U A

hsa-miR-920 MIMAT0004970 Homo sapiens miR-920 Targets (miRBase)

Match Rank:2
Score:0.66
Offset:-10
Orientation:forward strand
Alignment:----------ATRGCTC---
TACTGCTTCCACAGCTCCCC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U A C G U A C G U
A C G U C G U A A G U C A C G U A C U G A G U C A C G U A C G U A G U C A G U C C G U A A G U C C G U A A C U G A G U C A C G U A G U C A G U C A G U C A G U C

hsa-miR-505* MIMAT0004776 Homo sapiens miR-505* Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-13
Orientation:forward strand
Alignment:-------------ATRGCTC--
ACATCAATACTTCCTGGCTCCC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U A C G U
C G U A A G U C C G U A A C G U A G U C C G U A C G U A A C G U C G U A A G U C A C G U A C G U A G U C A G U C A C G U A C U G A C U G A G U C A C G U A G U C A G U C A G U C

hsa-miR-4633-3p MIMAT0019690 Homo sapiens miR-4633-3p Targets (miRBase)

Match Rank:4
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------ATRGCTC--
TGCATATGCCTGGCTAGCTCCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U A C G U
A C G U A C U G A G U C C G U A A C G U C G U A A C G U A C U G A G U C A G U C A C G U A C U G A C U G A G U C A C G U C G U A A C U G A G U C A C G U A G U C A G U C A C G U

hsa-miR-610 MIMAT0003278 Homo sapiens miR-610 Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------ATRGCTC-
TCCCAGCACACATTTAGCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U
A C G U A G U C A G U C A G U C C G U A A C U G A G U C C G U A A G U C C G U A A G U C C G U A A C G U A C G U A C G U C G U A A C U G A G U C A C G U A G U C C G U A

hsa-miR-24 MIMAT0000080 Homo sapiens miR-24 Targets (miRBase)

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATRGCTC----------------
-TGGCTCAGTTCAGCAGGAACAG
 C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A C G U A C U G A C U G A G U C A C G U A G U C C G U A A C U G A C G U A C G U A G U C C G U A A C U G A G U C C G U A A C U G A C U G C G U A C G U A A G U C C G U A A C U G

hsa-miR-760 MIMAT0004957 Homo sapiens miR-760 Targets (miRBase)

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATRGCTC--------------
-CGGCTCTGGGTCTGTGGGGA
 C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A G U C A C U G A C U G A G U C A C G U A G U C A C G U A C U G A C U G A C U G A C G U A G U C A C G U A C U G A C G U A C U G A C U G A C U G A C U G C G U A

hsa-miR-149 MIMAT0000450 Homo sapiens miR-149 Targets (miRBase)

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATRGCTC---------------
TCTGGCTCCGTGTCTTCACTCCC
 A C G U C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A G U C A C G U A C U G A C U G A G U C A C G U A G U C A G U C A C U G A C G U A C U G A C G U A G U C A C G U A C G U A G U C C G U A A G U C A C G U A G U C A G U C A G U C

hsa-miR-1276 MIMAT0005930 Homo sapiens miR-1276 Targets (miRBase)

Match Rank:9
Score:0.62
Offset:-9
Orientation:forward strand
Alignment:---------ATRGCTC----
TGTCTCCACAGGGCTCTTTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U A C G U A C G U A C G U
A C G U A C U G A C G U A G U C A C G U A G U C A G U C C G U A A G U C C G U A A C U G A C U G A C U G A G U C A C G U A G U C A C G U A C G U A C G U C G U A

hsa-miR-652 MIMAT0003322 Homo sapiens miR-652 Targets (miRBase)

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATRGCTC-------------
AATGGCGCCACTAGGGTTGTG
 A C G U C G U A A G C U C U A G A C U G A G U C A C G U A G U C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A C G U A A C G U A C U G A C U G A G U C A C U G A G U C A G U C C G U A A G U C A C G U C G U A A C U G A C U G A C U G A C G U A C G U A C U G A C G U A C U G