Information for 12-CGCTCTCT (Motif 12)

U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U
Reverse Opposite:
G C U A C U A G C G U A A U C G U C G A A U C G G A U C A U C G
p-value:1e-5
log p-value:-1.211e+01
Information Content per bp:1.806
Number of Target Sequences with motif491.0
Percentage of Target Sequences with motif49.10%
Number of Background Sequences with motif387.5
Percentage of Background Sequences with motif39.23%
Average Position of motif in Targets282.0 +/- 165.5bp
Average Position of motif in Background241.0 +/- 189.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4723-3p MIMAT0019839 Homo sapiens miR-4723-3p Targets (miRBase)

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGCTCTCT--------------
CCCTCTCTGGCTCCTCCCCAAA
 U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A G U C A G U C A G U C A C G U A G U C A C G U A G U C A C G U A C U G A C U G A G U C A C G U A G U C A G U C A C G U A G U C A G U C A G U C A G U C C G U A C G U A C G U A

hsa-miR-4639-3p MIMAT0019698 Homo sapiens miR-4639-3p Targets (miRBase)

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCTCT-----------
TCACTCTCACCTTGCTTTGC
 A C G U U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A G U C C G U A A G U C A C G U A G U C A C G U A G U C C G U A A G U C A G U C A C G U A C G U A C U G A G U C A C G U A C G U A C G U A C U G A G U C

hsa-miR-4311 MIMAT0016863 Homo sapiens miR-4311 Targets (miRBase)

Match Rank:3
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CGCTCTCT---
CACACTCAGCTCTCTTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U
A G U C C G U A A G U C C G U A A G U C A C G U A G U C C G U A A C U G A G U C A C G U A G U C A C G U A G U C A C G U A C G U A C G U A G U C

hsa-miR-3183 MIMAT0015063 Homo sapiens miR-3183 Targets (miRBase)

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGCTCTCT--------------
GCCTCTCTCGGAGTCGCTCGGA
 U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C U G A G U C A G U C A C G U A G U C A C G U A G U C A C G U A G U C A C U G A C U G C G U A A C U G A C G U A G U C A C U G A G U C A C G U A G U C A C U G A C U G C G U A

hsa-miR-4693-3p MIMAT0019785 Homo sapiens miR-4693-3p Targets (miRBase)

Match Rank:5
Score:0.70
Offset:-15
Orientation:forward strand
Alignment:---------------CGCTCTCT
AAATACTGTGAATTCCACTCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U
C G U A C G U A C G U A A C G U C G U A A G U C A C G U A C U G A C G U A C U G C G U A C G U A A C G U A C G U A G U C A G U C C G U A A G U C A C G U A G U C A C G U A G U C C G U A

hsa-miR-4684-5p MIMAT0019769 Homo sapiens miR-4684-5p Targets (miRBase)

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGCTCTCT----------------
--CTCTCTACTGACTTGCAACATA
 U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A C G U A G U C A C G U A G U C A C G U A G U C A C G U C G U A A G U C A C G U A C U G C G U A A G U C A C G U A C G U A C U G A G U C C G U A C G U A A G U C C G U A A C G U C G U A

hsa-miR-4306 MIMAT0016858 Homo sapiens miR-4306 Targets (miRBase)

Match Rank:7
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CGCTCTCT---
TACTGCCTTTCTCTCCA
 A C G U A C G U A C G U A C G U A C G U A C G U U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U
A C G U C G U A A G U C A C G U A C U G A G U C A G U C A C G U A C G U A C G U A G U C A C G U A G U C A C G U A G U C A G U C C G U A

hsa-miR-4315 MIMAT0016866 Homo sapiens miR-4315 Targets (miRBase)

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCTCT---------
CCGCTTTCTGAGCTGGAC
 A C G U U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A G U C A G U C A C U G A G U C A C G U A C G U A C G U A G U C A C G U A C U G C G U A A C U G A G U C A C G U A C U G A C U G C G U A A G U C

hsa-miR-3976 MIMAT0019361 Homo sapiens miR-3976 Targets (miRBase)

Match Rank:9
Score:0.67
Offset:-13
Orientation:forward strand
Alignment:-------------CGCTCTCT---
ACATTAATCTTCCTGCTCTCTATA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U
C G U A A G U C C G U A A C G U A C G U C G U A C G U A A C G U A G U C A C G U A C G U A G U C A G U C A C G U A C U G A G U C A C G U A G U C A C G U A G U C A C G U C G U A A C G U C G U A

hsa-miR-4644 MIMAT0019704 Homo sapiens miR-4644 Targets (miRBase)

Match Rank:10
Score:0.66
Offset:-12
Orientation:forward strand
Alignment:------------CGCTCTCT---
CTTCTGTCTCTTTTCTCTCTCCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C C U A G A U G C A C G U A U G C A C G U A G U C C A G U A C G U A C G U A C G U
A G U C A C G U A C G U A G U C A C G U A C U G A C G U A G U C A C G U A G U C A C G U A C G U A C G U A C G U A G U C A C G U A G U C A C G U A G U C A C G U A G U C A G U C C G U A