Information for 3-TTTGGGC (Motif 3)

A C G U A C G U A C G U A U C G A C U G A C U G A U G C
Reverse Opposite:
U A C G U G A C G U A C U A G C G U C A U G C A G U C A
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.766
Number of Target Sequences with motif308.0
Percentage of Target Sequences with motif30.80%
Number of Background Sequences with motif184.7
Percentage of Background Sequences with motif18.70%
Average Position of motif in Targets244.7 +/- 158.3bp
Average Position of motif in Background245.8 +/- 176.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-186* MIMAT0004612 Homo sapiens miR-186* Targets (miRBase)

Match Rank:1
Score:0.79
Offset:-15
Orientation:forward strand
Alignment:---------------TTTGGGC
CCCAAAAAATTCACCTTTGGGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C
A G U C A G U C A G U C C G U A C G U A C G U A C G U A C G U A C G U A A C G U A C G U A G U C C G U A A G U C A G U C A C G U A C G U A C G U A C U G A C U G A C U G A G U C

hsa-miR-4296 MIMAT0016845 Homo sapiens miR-4296 Targets (miRBase)

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGGC---------
ATGTGGGCTCAGGCTCA
 A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A A C G U A C U G A C G U A C U G A C U G A C U G A G U C A C G U A G U C C G U A A C U G A C U G A G U C A C G U A G U C C G U A

hsa-miR-4265 MIMAT0016891 Homo sapiens miR-4265 Targets (miRBase)

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGGC-----------
CTGTGGGCTCAGCTCTGGG
 A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A G U C A C G U A C U G A C G U A C U G A C U G A C U G A G U C A C G U A G U C C G U A A C U G A G U C A C G U A G U C A C G U A C U G A C U G A C U G

hsa-miR-4322 MIMAT0016873 Homo sapiens miR-4322 Targets (miRBase)

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGGC-------------
CTGTGGGCTCAGCGCGTGGGG
 A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A G U C A C G U A C U G A C G U A C U G A C U G A C U G A G U C A C G U A G U C C G U A A C U G A G U C A C U G A G U C A C U G A C G U A C U G A C U G A C U G A C U G

hsa-miR-3926 MIMAT0018201 Homo sapiens miR-3926 Targets (miRBase)

Match Rank:5
Score:0.71
Offset:-13
Orientation:forward strand
Alignment:-------------TTTGGGC-
TCTCTGCCTGCTTTTTGGCCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U
A C G U A G U C A C G U A G U C A C G U A C U G A G U C A G U C A C G U A C U G A G U C A C G U A C G U A C G U A C G U A C G U A C U G A C U G A G U C A G U C C G U A

hsa-miR-4260 MIMAT0016881 Homo sapiens miR-4260 Targets (miRBase)

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGGC-----------
CTTGGGGCATGGAGTCCCA
 A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A G U C A C G U A C G U A C U G A C U G A C U G A C U G A G U C C G U A A C G U A C U G A C U G C G U A A C U G A C G U A G U C A G U C A G U C C G U A

hsa-miR-3136-3p MIMAT0019203 Homo sapiens miR-3136-3p Targets (miRBase)

Match Rank:7
Score:0.69
Offset:-13
Orientation:forward strand
Alignment:-------------TTTGGGC--
ACTAACTGAATAGGTTGGGCCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U A C G U
C G U A A G U C A C G U C G U A C G U A A G U C A C G U A C U G C G U A C G U A A C G U C G U A A C U G A C U G A C G U A C G U A C U G A C U G A C U G A G U C A G U C C G U A

hsa-miR-2113 MIMAT0009206 Homo sapiens miR-2113 Targets (miRBase)

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGGC-------------
ATTTGTGCTTGGCTCTGTCAC
 A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A A C G U A C G U A C G U A C U G A C G U A C U G A G U C A C G U A C G U A C U G A C U G A G U C A C G U A G U C A C G U A C U G A C G U A G U C C G U A A G U C

hsa-miR-2909 MIMAT0013863 Homo sapiens miR-2909 Targets (miRBase)

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGGC-------------
GTTAGGGCCAACATCTCTTGG
 A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C U G A C G U A C G U C G U A A C U G A C U G A C U G A G U C A G U C C G U A C G U A A G U C C G U A A C G U A G U C A C G U A G U C A C G U A C G U A C U G A C U G

hsa-miR-18b* MIMAT0004751 Homo sapiens miR-18b* Targets (miRBase)

Match Rank:10
Score:0.67
Offset:-14
Orientation:forward strand
Alignment:--------------TTTGGGC-
GCCAGAAGGGGCATTTAGGGCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U C G A C U G A C U G A U G C A C G U
A C U G A G U C A G U C C G U A A C U G C G U A C G U A A C U G A C U G A C U G A C U G A G U C C G U A A C G U A C G U A C G U C G U A A C U G A C U G A C U G A G U C C G U A