Information for 4-AGACGAG (Motif 5)

C G U A C A U G U G C A U A G C A C U G U C G A C U A G
Reverse Opposite:
G A U C A G C U U G A C A U C G A C G U G U A C G C A U
p-value:1e-8
log p-value:-2.049e+01
Information Content per bp:1.657
Number of Target Sequences with motif223.0
Percentage of Target Sequences with motif22.30%
Number of Background Sequences with motif120.2
Percentage of Background Sequences with motif12.16%
Average Position of motif in Targets207.7 +/- 147.5bp
Average Position of motif in Background245.8 +/- 168.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4638-5p MIMAT0019695 Homo sapiens miR-4638-5p Targets (miRBase)

Match Rank:1
Score:0.74
Offset:-13
Orientation:forward strand
Alignment:-------------AGACGAG-
ACTTGTCCACCGCAGCCGAGT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U
C G U A A G U C A C G U A C G U A C U G A C G U A G U C A G U C C G U A A G U C A G U C A C U G A G U C C G U A A C U G A G U C A G U C A C U G C G U A A C U G A C G U

hsa-miR-208a MIMAT0000241 Homo sapiens miR-208a Targets (miRBase)

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AGACGAG------------
ATAAGACGAGCAAAAAGCTTGT
 A C G U A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A A C G U C G U A C G U A A C U G C G U A A G U C A C U G C G U A A C U G A G U C C G U A C G U A C G U A C G U A C G U A A C U G A G U C A C G U A C G U A C U G A C G U

hsa-miR-4537 MIMAT0019080 Homo sapiens miR-4537 Targets (miRBase)

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGACGAG-------------
TGAGCCGAGCTGAGCTTAGCTG
 A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A C U G C G U A A C U G A G U C A G U C A C U G C G U A A C U G A G U C A C G U A C U G C G U A A C U G A G U C A C G U A C G U C G U A A C U G A G U C A C G U A C U G

hsa-miR-877 MIMAT0004949 Homo sapiens miR-877 Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGACGAG-----------
GTAGAGGAGATGGCGCAGGG
 A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C U G A C G U C G U A A C U G C G U A A C U G A C U G C G U A A C U G C G U A A C G U A C U G A C U G A G U C A C U G A G U C C G U A A C U G A C U G A C U G

hsa-miR-3663-5p MIMAT0018084 Homo sapiens miR-3663-5p Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-13
Orientation:forward strand
Alignment:-------------AGACGAG-
CCGAGCACCACGCAGACCAGC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U
A G U C A G U C A C U G C G U A A C U G A G U C C G U A A G U C A G U C C G U A A G U C A C U G A G U C C G U A A C U G C G U A A G U C A G U C C G U A A C U G A G U C

hsa-miR-1238 MIMAT0005593 Homo sapiens miR-1238 Targets (miRBase)

Match Rank:6
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------AGACGAG----
GGGGCAGACAGACGAGGAAG
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U A C G U A C G U A C G U
A C U G A C U G A C U G A C U G A G U C C G U A A C U G C G U A A G U C C G U A A C U G C G U A A G U C A C U G C G U A A C U G A C U G C G U A C G U A A C U G

hsa-miR-483-5p MIMAT0004761 Homo sapiens miR-483-5p Targets (miRBase)

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGACGAG--------------
AAGACGGGAGGAAAGAAGGGAG
 A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A C G U A A C U G C G U A A G U C A C U G A C U G A C U G C G U A A C U G A C U G C G U A C G U A C G U A A C U G C G U A C G U A A C U G A C U G A C U G C G U A A C U G

hsa-miR-208b MIMAT0004960 Homo sapiens miR-208b Targets (miRBase)

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGACGAG------------
ATAAGACGAACAAAAGGTTTGT
 A C G U A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A A C G U C G U A C G U A A C U G C G U A A G U C A C U G C G U A C G U A A G U C C G U A C G U A C G U A C G U A A C U G A C U G A C G U A C G U A C G U A C U G A C G U

hsa-let-7d* MIMAT0004484 Homo sapiens let-7d* Targets (miRBase)

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGACGAG-------------
CTATACGACCTGCTGCCTTTCT
 A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A G U C A C G U C G U A A C G U C G U A A G U C A C U G C G U A A G U C A G U C A C G U A C U G A G U C A C G U A C U G A G U C A G U C A C G U A C G U A C G U A G U C A C G U

hsa-miR-4655-3p MIMAT0019722 Homo sapiens miR-4655-3p Targets (miRBase)

Match Rank:10
Score:0.61
Offset:-11
Orientation:forward strand
Alignment:-----------AGACGAG---
CCCCGGGGACCTGACGAGGGT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C G U A C A U G U G C A U A G C A C U G U C G A C U A G A C G U A C G U A C G U
A G U C A G U C A G U C A G U C A C U G A C U G A C U G A C U G C G U A A G U C A G U C A C G U A C U G C G U A A G U C A C U G C G U A A C U G A C U G A C U G A C G U