Information for 7-AGCCGCT (Motif 7)

G C U A A C U G A G U C U G A C A U C G A U G C A G C U
Reverse Opposite:
U C G A A U C G A U G C A C U G A C U G A G U C C G A U
p-value:1e-7
log p-value:-1.752e+01
Information Content per bp:1.796
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif14.90%
Number of Background Sequences with motif71.1
Percentage of Background Sequences with motif7.20%
Average Position of motif in Targets260.8 +/- 177.4bp
Average Position of motif in Background215.8 +/- 155.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-646 MIMAT0003316 Homo sapiens miR-646 Targets (miRBase)

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGCT-----------
AAGCAGCTGCCTCTGAGGC
 A C G U G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A C G U A A C U G A G U C C G U A A C U G A G U C A C G U A C U G A G U C A G U C A C G U A G U C A C G U A C U G C G U A A C U G A C U G A G U C

hsa-miR-337-5p MIMAT0004695 Homo sapiens miR-337-5p Targets (miRBase)

Match Rank:2
Score:0.67
Offset:-13
Orientation:forward strand
Alignment:-------------AGCCGCT-
AACTCCTGTATGAAGCCGTTC
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U
C G U A C G U A A G U C A C G U A G U C A G U C A C G U A C U G A C G U C G U A A C G U A C U G C G U A C G U A A C U G A G U C A G U C A C U G A C G U A C G U A G U C

hsa-miR-4688 MIMAT0019777 Homo sapiens miR-4688 Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-14
Orientation:forward strand
Alignment:--------------AGCCGCT-
CCCAGGTCCTCTGCTGCCCCTA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U
A G U C A G U C A G U C C G U A A C U G A C U G A C G U A G U C A G U C A C G U A G U C A C G U A C U G A G U C A C G U A C U G A G U C A G U C A G U C A G U C A C G U C G U A

hsa-miR-3648 MIMAT0018068 Homo sapiens miR-3648 Targets (miRBase)

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCCGCT--------------
AGCCGCGGGGATCGCCGAGGG
 G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
C G U A A C U G A G U C A G U C A C U G A G U C A C U G A C U G A C U G A C U G C G U A A C G U A G U C A C U G A G U C A G U C A C U G C G U A A C U G A C U G A C U G

hsa-miR-185* MIMAT0004611 Homo sapiens miR-185* Targets (miRBase)

Match Rank:5
Score:0.65
Offset:-15
Orientation:forward strand
Alignment:---------------AGCCGCT
GACCAGAGGAAAGCCAGCCCCT
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G C U A A C U G A G U C U G A C A U C G A U G C A G C U
A C U G C G U A A G U C A G U C C G U A A C U G C G U A A C U G A C U G C G U A C G U A C G U A A C U G A G U C A G U C C G U A A C U G A G U C A G U C A G U C A G U C A C G U

hsa-miR-1225-3p MIMAT0005573 Homo sapiens miR-1225-3p Targets (miRBase)

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGCCGCT-------------
TGAGCCCCTGTGCCGCCCCCAG
 A C G U A C G U G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A C U G C G U A A C U G A G U C A G U C A G U C A G U C A C G U A C U G A C G U A C U G A G U C A G U C A C U G A G U C A G U C A G U C A G U C A G U C C G U A A C U G

hsa-miR-423-5p MIMAT0004748 Homo sapiens miR-423-5p Targets (miRBase)

Match Rank:7
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------AGCCGCT--
AAAGTCTCGCTCTCTGCCCCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U A C G U
C G U A C G U A C G U A A C U G A C G U A G U C A C G U A G U C A C U G A G U C A C G U A G U C A C G U A G U C A C G U A C U G A G U C A G U C A G U C A G U C A C G U A G U C C G U A

hsa-miR-4749-3p MIMAT0019886 Homo sapiens miR-4749-3p Targets (miRBase)

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCCGCT---------------
CGCCCCTCCTGCCCCCACAGAA
 G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A G U C A C U G A G U C A G U C A G U C A G U C A C G U A G U C A G U C A C G U A C U G A G U C A G U C A G U C A G U C A G U C C G U A A G U C C G U A A C U G C G U A C G U A

hsa-miR-4632 MIMAT0019688 Homo sapiens miR-4632 Targets (miRBase)

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCCGCT----------------
TGCCGCCCTCTCGCTGCTCTAGA
 G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U
A C G U A C U G A G U C A G U C A C U G A G U C A G U C A G U C A C G U A G U C A C G U A G U C A C U G A G U C A C G U A C U G A G U C A C G U A G U C A C G U C G U A A C U G C G U A

hsa-miR-558 MIMAT0003222 Homo sapiens miR-558 Targets (miRBase)

Match Rank:10
Score:0.63
Offset:-10
Orientation:forward strand
Alignment:----------AGCCGCT--
ATTTTGGTACAGCAGCTCA
 A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U G C U A A C U G A G U C U G A C A U C G A U G C A G C U A C G U A C G U
C G U A A C G U A C G U A C G U A C G U A C U G A C U G A C G U C G U A A G U C C G U A A C U G A G U C C G U A A C U G A G U C A C G U A G U C C G U A